CustusX  16.5
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cxRouteToTargetFilterService.cpp
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32 
33 #include "cxRouteToTargetFilterService.h"
34 
35 #include <ctkPluginContext.h>
36 
37 #include "cxAlgorithmHelpers.h"
38 #include "cxSelectDataStringProperty.h"
39 
40 #include "cxUtilHelpers.h"
41 #include "cxRegistrationTransform.h"
42 #include "cxStringProperty.h"
43 #include "cxDoubleProperty.h"
44 #include "cxBoolProperty.h"
45 #include "cxTypeConversions.h"
46 
47 #include "cxRouteToTarget.h"
48 #include "cxPatientModelService.h"
49 #include "cxPointMetric.h"
50 #include "cxVisServices.h"
51 #include "cxStringPropertySelectPointMetric.h"
52 #include "cxPatientModelServiceProxy.h"
53 
54 
55 namespace cx
56 {
57 
58 RouteToTargetFilter::RouteToTargetFilter(ctkPluginContext *pluginContext) :
59  FilterImpl(VisServicesPtr(new VisServices(pluginContext)) )
60 {
61  mRouteToTarget = RouteToTargetPtr(new RouteToTarget());
62 }
63 
64 QString RouteToTargetFilter::getName() const
65 {
66  return "Route to target";
67 }
68 
69 QString RouteToTargetFilter::getType() const
70 {
71  return "RouteToTargetFilter";
72 }
73 
74 QString RouteToTargetFilter::getHelp() const
75 {
76  return "<html>"
77  "<h3>Route to target.</h3>"
78  "<p>Calculates the route to a selected target in navigated bronchocopy."
79  "The rout starts at the top of trachea and ends at the most adjacent airway centerline"
80  "from the target.</p>"
81  "</html>";
82 }
83 
84 
85 void RouteToTargetFilter::createOptions()
86 {
87 
88 }
89 
90 void RouteToTargetFilter::createInputTypes()
91 {
92  StringPropertySelectMeshPtr centerline;
93  centerline = StringPropertySelectMesh::New(mServices->patient());
94  centerline->setValueName("Centerline");
95  centerline->setHelp("Select centerline");
96  mInputTypes.push_back(centerline);
97 
98  StringPropertySelectPointMetricPtr targetPoint;
99  targetPoint = StringPropertySelectPointMetric::New(mServices->patient());
100  targetPoint->setValueName("Target point");
101  targetPoint->setHelp("Select point metric input");
102  connect(targetPoint.get(), SIGNAL(dataChanged(QString)), this, SLOT(pointMetricChangedSlot(QString)));
103  mInputTypes.push_back(targetPoint);
104 
105 }
106 
107 void RouteToTargetFilter::createOutputTypes()
108 {
109 
110  StringPropertySelectMeshPtr tempMeshStringAdapter;
111 
112  tempMeshStringAdapter = StringPropertySelectMesh::New(mServices->patient());
113  tempMeshStringAdapter->setValueName("Centerline mesh");
114  tempMeshStringAdapter->setHelp("Generated route to target mesh (vtk-format).");
115  mOutputTypes.push_back(tempMeshStringAdapter);
116 
117 }
118 
119 
120 bool RouteToTargetFilter::execute()
121 {
122  MeshPtr mesh = boost::dynamic_pointer_cast<StringPropertySelectMesh>(mInputTypes[0])->getMesh();
123 
124  vtkPolyDataPtr centerline = mesh->getVtkPolyData();
125 
126  PointMetricPtr targetPoint = boost::dynamic_pointer_cast<StringPropertySelectPointMetric>(mInputTypes[1])->getPointMetric();
127 
128  Vector3D targetCoordinate = targetPoint->getCoordinate();
129 
130  mRouteToTarget->processCenterline(centerline);
131  mOutput = mRouteToTarget->findRouteToTarget(targetCoordinate);
132 
133  return true;
134 }
135 
136 bool RouteToTargetFilter::postProcess()
137 {
138 
139  MeshPtr inputMesh = boost::dynamic_pointer_cast<StringPropertySelectMesh>(mInputTypes[0])->getMesh();
140 
141  QString uidCenterline = inputMesh->getUid() + "_rtt_cl%1";
142  QString nameCenterline = inputMesh->getName()+"_rtt_cl%1";
143 
144  MeshPtr outputCenterline = patientService()->createSpecificData<Mesh>(uidCenterline, nameCenterline);
145 
146  outputCenterline->setVtkPolyData(mOutput);
147 
148  if (!outputCenterline)
149  return false;
150 
151  outputCenterline->get_rMd_History()->setRegistration(inputMesh->get_rMd());
152 
153  patientService()->insertData(outputCenterline);
154 
155  mOutputTypes[0]->setValue(outputCenterline->getUid());
156 
157 
158  return true;
159 }
160 
161 
162 } // namespace cx
163 
cx::FilterImpl::mInputTypes
std::vector< SelectDataStringPropertyBasePtr > mInputTypes
Definition: cxFilterImpl.h:94
cx::RouteToTargetPtr
boost::shared_ptr< class RouteToTarget > RouteToTargetPtr
Definition: cxRouteToTarget.h:12
cx::Mesh
A mesh data set.
Definition: cxMesh.h:61
cx::RouteToTargetFilter::RouteToTargetFilter
RouteToTargetFilter(ctkPluginContext *pluginContext)
Definition: cxRouteToTargetFilterService.cpp:58
cx::VisServicesPtr
boost::shared_ptr< class VisServices > VisServicesPtr
Definition: cxMainWindow.h:62
vtkPolyDataPtr
vtkSmartPointer< class vtkPolyData > vtkPolyDataPtr
Definition: cxAirwaysFilterService.h:52
cx::FilterImpl::mServices
VisServicesPtr mServices
Definition: cxFilterImpl.h:103
cx::FilterImpl::patientService
PatientModelServicePtr patientService()
Definition: cxFilterImpl.cpp:51
cx::Mesh::setVtkPolyData
void setVtkPolyData(const vtkPolyDataPtr &polyData)
Definition: cxMesh.cpp:100
cx::Vector3D
Eigen::Vector3d Vector3D
Vector3D is a representation of a point or vector in 3D.
Definition: cxVector3D.h:63
cx::FilterImpl::mOutputTypes
std::vector< SelectDataStringPropertyBasePtr > mOutputTypes
Definition: cxFilterImpl.h:95
cx::StringPropertySelectPointMetric::New
static StringPropertySelectPointMetricPtr New(PatientModelServicePtr patientModelService)
Definition: cxStringPropertySelectPointMetric.h:48
cx::StringPropertySelectMesh::New
static StringPropertySelectMeshPtr New(PatientModelServicePtr patientModelService)
Definition: cxSelectDataStringProperty.h:152
cx::StringPropertySelectPointMetricPtr
boost::shared_ptr< class StringPropertySelectPointMetric > StringPropertySelectPointMetricPtr
Definition: cxStringPropertySelectPointMetric.h:39
cx::MeshPtr
boost::shared_ptr< class Mesh > MeshPtr
Definition: cxForwardDeclarations.h:68
cx::StringPropertySelectMeshPtr
boost::shared_ptr< class StringPropertySelectMesh > StringPropertySelectMeshPtr
Definition: cxRecordSessionSelector.h:47
cx::PointMetricPtr
boost::shared_ptr< class PointMetric > PointMetricPtr
Definition: cxForwardDeclarations.h:103