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cxLevelSetFilterService.h
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1 /*=========================================================================
2 This file is part of CustusX, an Image Guided Therapy Application.
3 
4 Copyright (c) 2008-2014, SINTEF Department of Medical Technology
5 All rights reserved.
6 
7 Redistribution and use in source and binary forms, with or without
8 modification, are permitted provided that the following conditions are met:
9 
10 1. Redistributions of source code must retain the above copyright notice,
11  this list of conditions and the following disclaimer.
12 
13 2. Redistributions in binary form must reproduce the above copyright notice,
14  this list of conditions and the following disclaimer in the documentation
15  and/or other materials provided with the distribution.
16 
17 3. Neither the name of the copyright holder nor the names of its contributors
18  may be used to endorse or promote products derived from this software
19  without specific prior written permission.
20 
21 THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
22 AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
23 IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE
24 DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR CONTRIBUTORS BE LIABLE
25 FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL
26 DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR
27 SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER
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29 OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE
30 OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
31 =========================================================================*/
32 
33 #ifndef CXLEVELSETFILTER_H_
34 #define CXLEVELSETFILTER_H_
35 
36 #include "cxFilterImpl.h"
37 #include "cxVector3D.h"
38 #include "org_custusx_filter_levelset_Export.h"
39 class ctkPluginContext;
40 
41 typedef vtkSmartPointer<class vtkImageData> vtkImageDataPtr;
42 typedef vtkSmartPointer<class vtkImageImport> vtkImageImportPtr;
43 namespace cx
44 {
45 
46 class org_custusx_filter_levelset_EXPORT LevelSetFilter: public FilterImpl
47 {
48 Q_OBJECT
49 
50 public:
51  LevelSetFilter(ctkPluginContext *pluginContext);
52  virtual ~LevelSetFilter()
53  {
54  }
55 
56  virtual QString getType() const;
57  virtual QString getName() const;
58  virtual QString getHelp() const;
59  virtual void setActive(bool on);
60 
61  bool preProcess();
62  virtual bool execute();
63  virtual bool postProcess();
64 
65  // extensions:
66  DoublePropertyPtr getThresholdOption(QDomElement root);
67  DoublePropertyPtr getEpsilonOption(QDomElement root);
68  DoublePropertyPtr getAlphaOption(QDomElement root);
69  DoublePropertyPtr getRadiusOption(QDomElement root);
70 
71  static Vector3D getSeedPointFromTool(SpaceProviderPtr spaceProvider, DataPtr image);
72  static bool isSeedPointInsideImage(Vector3D, DataPtr);
73  QDomElement getmOptions();
74 
75 protected:
76  virtual void createOptions();
77  virtual void createInputTypes();
78  virtual void createOutputTypes();
79 private:
80  vtkImageDataPtr convertToVtkImageData(char * data, int size_x, int size_y,
81  int size_z, ImagePtr input);
82  vtkImageDataPtr importRawImageData(void * data, int size_x, int size_y,
83  int size_z, ImagePtr input, int type);
84  std::string filename;
85  Vector3D seedPoint;
86  ImagePtr image;
87  vtkImageDataPtr rawSegmentation;
88 
89 };
90 // end LevelSetFilter class
91 
92 typedef boost::shared_ptr<class LevelSetFilter> LevelSetFilterPtr;
93 
94 } // end namespace
95 
96 #endif /* CXLEVELSETFILTER_H_ */
boost::shared_ptr< class SpaceProvider > SpaceProviderPtr
boost::shared_ptr< class Image > ImagePtr
Definition: cxDicomWidget.h:48
vtkSmartPointer< class vtkImageImport > vtkImageImportPtr
boost::shared_ptr< class LevelSetFilter > LevelSetFilterPtr
boost::shared_ptr< class Data > DataPtr
cxLogicManager_EXPORT SpaceProviderPtr spaceProvider()
boost::shared_ptr< class DoubleProperty > DoublePropertyPtr
Eigen::Vector3d Vector3D
Vector3D is a representation of a point or vector in 3D.
Definition: cxVector3D.h:63
vtkSmartPointer< class vtkImageData > vtkImageDataPtr
vtkSmartPointer< class vtkImageData > vtkImageDataPtr