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cxVolumeHelpers.h
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1 /*=========================================================================
2 This file is part of CustusX, an Image Guided Therapy Application.
3 
4 Copyright (c) 2008-2014, SINTEF Department of Medical Technology
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31 =========================================================================*/
32 
33 #ifndef CXVOLUMEHELPERS_H_
34 #define CXVOLUMEHELPERS_H_
35 
36 #include "cxResourceExport.h"
37 
38 #include <map>
39 #include "cxVector3D.h"
40 #include "vtkForwardDeclarations.h"
41 #include "cxBoundingBox3D.h"
42 #include "cxTransform3D.h"
43 #include "cxForwardDeclarations.h"
44 
45 namespace cx
46 {
47 typedef boost::shared_ptr<class Image> ImagePtr;
48 typedef boost::shared_ptr<class Data> DataPtr;
49 
55 cxResource_EXPORT vtkImageDataPtr generateVtkImageData(Eigen::Array3i dim, Vector3D spacing, const unsigned char initValue, int components = 1);
56 cxResource_EXPORT vtkImageDataPtr generateVtkImageDataUnsignedShort(Eigen::Array3i dim,
57  Vector3D spacing,
58  const unsigned short initValue,
59  int components = 1);
60 cxResource_EXPORT vtkImageDataPtr generateVtkImageDataSignedShort(Eigen::Array3i dim,
61  Vector3D spacing,
62  const short initValue,
63  int components = 1);
64 cxResource_EXPORT vtkImageDataPtr generateVtkImageDataDouble(Eigen::Array3i dim, Vector3D spacing, double initValue);
65 cxResource_EXPORT void fillShortImageDataWithGradient(vtkImageDataPtr data, int maxValue);
66 cxResource_EXPORT ImagePtr createDerivedImage(PatientModelServicePtr dataManager, QString uid, QString name, vtkImageDataPtr raw, ImagePtr parent);
67 
68 
78 cxResource_EXPORT ImagePtr convertImageToUnsigned(PatientModelServicePtr dataManager, ImagePtr image, vtkImageDataPtr suggestedConvertedVolume = vtkImageDataPtr(), bool verbose = true);
79 
80 cxResource_EXPORT std::map<std::string, std::string> getDisplayFriendlyInfo(ImagePtr image);
81 cxResource_EXPORT std::map<std::string, std::string> getDisplayFriendlyInfo(vtkImageDataPtr image);
82 cxResource_EXPORT void printDisplayFriendlyInfo(std::map<std::string, std::string> map);
83 
84 cxResource_EXPORT int calculateNumVoxelsWithMaxValue(ImagePtr image);
85 cxResource_EXPORT int calculateNumVoxelsWithMinValue(ImagePtr image);
86 
87 cxResource_EXPORT DoubleBoundingBox3D findEnclosingBoundingBox(std::vector<DataPtr> data, Transform3D qMr = Transform3D::Identity());
88 cxResource_EXPORT DoubleBoundingBox3D findEnclosingBoundingBox(std::vector<ImagePtr> data, Transform3D qMr = Transform3D::Identity());
89 
90 
92 
93 cxResource_EXPORT vtkImageDataPtr convertImageDataTo8Bit(vtkImageDataPtr image, double windowWidth, double windowLevel);
94 
101 cxResource_EXPORT void setDeepModified(vtkImageDataPtr image);
102 
103 
108 }
109 
110 
111 #endif /* CXVOLUMEHELPERS_H_ */
std::map< std::string, std::string > getDisplayFriendlyInfo(MeshPtr mesh)
vtkImageDataPtr generateVtkImageDataUnsignedShort(Eigen::Array3i dim, Vector3D spacing, const unsigned short initValue, int components)
Transform3D Transform3D
Transform3D is a representation of an affine 3D transform.
boost::shared_ptr< class Image > ImagePtr
Definition: cxDicomWidget.h:48
int calculateNumVoxelsWithMinValue(ImagePtr image)
Find number of voxels containing min scalar value.
DoubleBoundingBox3D findEnclosingBoundingBox(std::vector< DataPtr > data, Transform3D qMr)
vtkImageDataPtr generateVtkImageDataSignedShort(Eigen::Array3i dim, Vector3D spacing, const short initValue, int components)
ImagePtr convertImageToUnsigned(PatientModelServicePtr dataManager, ImagePtr image, vtkImageDataPtr suggestedConvertedVolume, bool verbose)
boost::shared_ptr< class Data > DataPtr
ImagePtr createDerivedImage(PatientModelServicePtr dataManager, QString uid, QString name, vtkImageDataPtr raw, ImagePtr parent)
vtkImageDataPtr convertImageDataTo8Bit(vtkImageDataPtr image, double windowWidth, double windowLevel)
Have never been used or tested. Create a test for it.
boost::shared_ptr< class PatientModelService > PatientModelServicePtr
void fillShortImageDataWithGradient(vtkImageDataPtr data, int maxValue)
int calculateNumVoxelsWithMaxValue(ImagePtr image)
Find number of voxels containing max scalar value.
vtkImageDataPtr generateVtkImageData(Eigen::Array3i dim, Vector3D spacing, const unsigned char initValue, int components)
Eigen::Vector3d Vector3D
Vector3D is a representation of a point or vector in 3D.
Definition: cxVector3D.h:63
vtkImageDataPtr convertImageDataToGrayScale(vtkImageDataPtr image)
void setDeepModified(vtkImageDataPtr image)
vtkSmartPointer< class vtkImageData > vtkImageDataPtr
void printDisplayFriendlyInfo(std::map< std::string, std::string > map)
vtkImageDataPtr generateVtkImageDataDouble(Eigen::Array3i dim, Vector3D spacing, double initValue)