CustusX  15.3.4-beta
An IGT application
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cxRegistrationImplService.h
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1 /*=========================================================================
2 This file is part of CustusX, an Image Guided Therapy Application.
3 
4 Copyright (c) 2008-2014, SINTEF Department of Medical Technology
5 All rights reserved.
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8 modification, are permitted provided that the following conditions are met:
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10 1. Redistributions of source code must retain the above copyright notice,
11  this list of conditions and the following disclaimer.
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13 2. Redistributions in binary form must reproduce the above copyright notice,
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21 THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
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31 =========================================================================*/
32 
33 #ifndef CXREGISTRATIONIMPLSERVICE_H_
34 #define CXREGISTRATIONIMPLSERVICE_H_
35 
36 #include "cxRegistrationService.h"
37 #include <vector>
38 #include "org_custusx_registration_Export.h"
39 #include "qdatetime.h"
40 #include "cxLandmark.h"
41 #include "vtkForwardDeclarations.h"
42 class ctkPluginContext;
43 class QDomElement;
44 
45 namespace cx
46 {
47 class RegistrationTransform;
48 class PatientModelService;
49 typedef boost::shared_ptr<class PatientModelService> PatientModelServicePtr;
50 typedef boost::shared_ptr<class SessionStorageService> SessionStorageServicePtr;
51 
52 
62 class org_custusx_registration_EXPORT RegistrationImplService : public RegistrationService
63 {
64  Q_INTERFACES(cx::RegistrationService)
65 public:
66  RegistrationImplService(ctkPluginContext *context);
67  virtual ~RegistrationImplService();
68 
69  virtual void setMovingData(DataPtr data);
70  virtual void setFixedData(DataPtr data);
71  virtual DataPtr getMovingData();
72  virtual DataPtr getFixedData();
73 
74  virtual void doPatientRegistration();
75  virtual void doFastRegistration_Translation();
76  virtual void doFastRegistration_Orientation(const Transform3D& tMtm, const Transform3D &prMt);
77  virtual void doImageRegistration(bool translationOnly);
78  virtual void applyImage2ImageRegistration(Transform3D delta_pre_rMd, QString description);
79  virtual void applyPatientRegistration(Transform3D rMpr_new, QString description);
80  virtual void applyPatientOrientation(const Transform3D &tMtm, const Transform3D &prMt);
81 
82  virtual QDateTime getLastRegistrationTime();
83  virtual void setLastRegistrationTime(QDateTime time);
84 
85  virtual bool isNull();
86 
87 private slots:
88  void duringSavePatientSlot(QDomElement &node);
89  void duringLoadPatientSlot(QDomElement &node);
90  void addXml(QDomNode &parentNode);
91  void parseXml(QDomNode &dataNode);
92  void clearSlot();
93 private:
94  virtual void updateRegistration(QDateTime oldTime, RegistrationTransform deltaTransform, DataPtr data);
95 // PatientModelService* getPatientModelService();
96  void writePreLandmarkRegistration(QString name, LandmarkMap landmarks);
97  vtkPointsPtr convertTovtkPoints(const std::vector<QString> &uids, const LandmarkMap &data, Transform3D M);
98  std::vector<QString> getUsableLandmarks(const LandmarkMap &data_a, const LandmarkMap &data_b);
99  Transform3D performLandmarkRegistration(vtkPointsPtr source, vtkPointsPtr target, bool *ok) const;
100  std::vector<Vector3D> convertAndTransformToPoints(const std::vector<QString> &uids, const LandmarkMap &data, Transform3D M);
101  std::vector<Vector3D> convertVtkPointsToPoints(vtkPointsPtr base);
102 
103  DataPtr mFixedData;
104  DataPtr mMovingData;
105 
106  QDateTime mLastRegistrationTime;
107 
108  ctkPluginContext* mContext;
109  PatientModelServicePtr mPatientModelService;
110  SessionStorageServicePtr mSession;
111 };
112 
113 typedef boost::shared_ptr<RegistrationImplService> RegistrationImplServicePtr;
114 
115 } /* namespace cx */
116 
117 #endif /* CXREGISTRATIONIMPLSERVICE_H_ */
118 
Transform3D Transform3D
Transform3D is a representation of an affine 3D transform.
boost::shared_ptr< class Data > DataPtr
vtkPointsPtr convertTovtkPoints(Eigen::MatrixXd positions)
boost::shared_ptr< RegistrationImplService > RegistrationImplServicePtr
Registration services.
boost::shared_ptr< class PatientModelService > PatientModelServicePtr
A registration event and its transform.
Eigen::Matrix4d performLandmarkRegistration(vtkPointsPtr source, vtkPointsPtr target)
std::map< QString, class Landmark > LandmarkMap
boost::shared_ptr< class SessionStorageService > SessionStorageServicePtr
vtkSmartPointer< class vtkPoints > vtkPointsPtr