CustusX  15.8
An IGT application
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cxRegistrationImplService.h
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1 /*=========================================================================
2 This file is part of CustusX, an Image Guided Therapy Application.
3 
4 Copyright (c) 2008-2014, SINTEF Department of Medical Technology
5 All rights reserved.
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7 Redistribution and use in source and binary forms, with or without
8 modification, are permitted provided that the following conditions are met:
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10 1. Redistributions of source code must retain the above copyright notice,
11  this list of conditions and the following disclaimer.
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13 2. Redistributions in binary form must reproduce the above copyright notice,
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21 THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
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31 =========================================================================*/
32 
33 #ifndef CXREGISTRATIONIMPLSERVICE_H_
34 #define CXREGISTRATIONIMPLSERVICE_H_
35 
36 #include "cxRegistrationService.h"
37 #include <vector>
38 #include "org_custusx_registration_Export.h"
39 #include "qdatetime.h"
40 #include "cxLandmark.h"
41 #include "vtkForwardDeclarations.h"
42 class ctkPluginContext;
43 class QDomElement;
44 
45 namespace cx
46 {
47 class RegistrationTransform;
48 class PatientModelService;
49 typedef boost::shared_ptr<class PatientModelService> PatientModelServicePtr;
50 typedef boost::shared_ptr<class SessionStorageService> SessionStorageServicePtr;
51 
52 
62 class org_custusx_registration_EXPORT RegistrationImplService : public RegistrationService
63 {
64  Q_INTERFACES(cx::RegistrationService)
65 public:
66  RegistrationImplService(ctkPluginContext *context);
67  virtual ~RegistrationImplService();
68 
69  virtual void setMovingData(DataPtr data);
70  virtual void setFixedData(DataPtr data);
71  void setMovingData(QString uid);
72  void setFixedData(QString uid);
73  virtual DataPtr getMovingData();
74  virtual DataPtr getFixedData();
75 
76  virtual void doPatientRegistration();
77  virtual void doFastRegistration_Translation();
78  virtual void doFastRegistration_Orientation(const Transform3D& tMtm, const Transform3D &prMt);
79  virtual void doImageRegistration(bool translationOnly);
80  virtual void applyImage2ImageRegistration(Transform3D delta_pre_rMd, QString description);
81  virtual void applyPatientRegistration(Transform3D rMpr_new, QString description);
82  virtual void applyPatientOrientation(const Transform3D &tMtm, const Transform3D &prMt);
83 
84  virtual QDateTime getLastRegistrationTime();
85  virtual void setLastRegistrationTime(QDateTime time);
86 
87  virtual bool isNull();
88 
89 private slots:
90  void duringSavePatientSlot(QDomElement &node);
91  void duringLoadPatientSlot(QDomElement &node);
92  void addXml(QDomNode &parentNode);
93  void parseXml(QDomNode &dataNode);
94  void clearSlot();
95 private:
96  virtual void updateRegistration(QDateTime oldTime, RegistrationTransform deltaTransform, DataPtr data);
97 // PatientModelService* getPatientModelService();
98  void writePreLandmarkRegistration(QString name, LandmarkMap landmarks);
99  vtkPointsPtr convertTovtkPoints(const std::vector<QString> &uids, const LandmarkMap &data, Transform3D M);
100  std::vector<QString> getUsableLandmarks(const LandmarkMap &data_a, const LandmarkMap &data_b);
101  Transform3D performLandmarkRegistration(vtkPointsPtr source, vtkPointsPtr target, bool *ok) const;
102  std::vector<Vector3D> convertAndTransformToPoints(const std::vector<QString> &uids, const LandmarkMap &data, Transform3D M);
103  std::vector<Vector3D> convertVtkPointsToPoints(vtkPointsPtr base);
104 
105 // DataPtr mFixedData; ///< the data that shouldn't update its matrices during a registrations
106 // DataPtr mMovingData; ///< the data that should update its matrices during a registration
107  QString mFixedData;
108  QString mMovingData;
109 
110  QDateTime mLastRegistrationTime;
111 
112  ctkPluginContext* mContext;
113  PatientModelServicePtr mPatientModelService;
114  SessionStorageServicePtr mSession;
115 };
116 
117 typedef boost::shared_ptr<RegistrationImplService> RegistrationImplServicePtr;
118 
119 } /* namespace cx */
120 
121 #endif /* CXREGISTRATIONIMPLSERVICE_H_ */
122 
Transform3D Transform3D
Transform3D is a representation of an affine 3D transform.
boost::shared_ptr< class Data > DataPtr
vtkPointsPtr convertTovtkPoints(Eigen::MatrixXd positions)
boost::shared_ptr< RegistrationImplService > RegistrationImplServicePtr
Registration services.
boost::shared_ptr< class PatientModelService > PatientModelServicePtr
A registration event and its transform.
Eigen::Matrix4d performLandmarkRegistration(vtkPointsPtr source, vtkPointsPtr target)
std::map< QString, class Landmark > LandmarkMap
boost::shared_ptr< class SessionStorageService > SessionStorageServicePtr
vtkSmartPointer< class vtkPoints > vtkPointsPtr