CustusX  16.5
An IGT application
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cxPointSamplingWidget.cpp
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1 /*=========================================================================
2 This file is part of CustusX, an Image Guided Therapy Application.
3 
4 Copyright (c) 2008-2014, SINTEF Department of Medical Technology
5 All rights reserved.
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7 Redistribution and use in source and binary forms, with or without
8 modification, are permitted provided that the following conditions are met:
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10 1. Redistributions of source code must retain the above copyright notice,
11  this list of conditions and the following disclaimer.
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31 =========================================================================*/
32 #include "cxPointSamplingWidget.h"
33 
34 #include <QTreeWidget>
35 #include <QTreeWidgetItem>
36 #include <QStringList>
37 #include <QVBoxLayout>
38 #include <QHeaderView>
39 
40 
41 #include "cxTypeConversions.h"
43 #include "cxTrackingService.h"
44 #include "cxManualTool.h"
45 #include "cxLogger.h"
46 #include "cxLegacySingletons.h"
47 #include "cxSpaceProvider.h"
48 #include "cxPatientModelService.h"
49 #include "cxViewGroupData.h"
50 #include "cxViewService.h"
51 
52 
53 namespace cx
54 {
55 
57  BaseWidget(parent, "PointSamplingWidget", "Point sampler/3D ruler"),
58  mVerticalLayout(new QVBoxLayout(this)),
59  mTable(new QTableWidget(this)),
60  mActiveLandmark(""),
61  mAddButton(new QPushButton("Add", this)),
62  mEditButton(new QPushButton("Resample", this)),
63  mRemoveButton(new QPushButton("Remove", this)),
64  mLoadReferencePointsButton(new QPushButton("Load reference points", this))
65 {
66  this->setToolTip("Sample and store points");
68 
69  //table widget
70  connect(mTable, SIGNAL(itemSelectionChanged()), this, SLOT(itemSelectionChanged()));
71 
72  this->setLayout(mVerticalLayout);
73 
74  //pushbuttons
75  connect(mAddButton, SIGNAL(clicked()), this, SLOT(addButtonClickedSlot()));
76  mEditButton->setDisabled(true);
77  connect(mEditButton, SIGNAL(clicked()), this, SLOT(editButtonClickedSlot()));
78  mRemoveButton->setDisabled(true);
79  connect(mRemoveButton, SIGNAL(clicked()), this, SLOT(removeButtonClickedSlot()));
80  connect(mLoadReferencePointsButton, SIGNAL(clicked()), this, SLOT(loadReferencePointsSlot()));
81 
82  //layout
83  mVerticalLayout->addWidget(mTable);
84 
85  QHBoxLayout* buttonLayout = new QHBoxLayout;
86  mVerticalLayout->addLayout(buttonLayout);
87 
88  buttonLayout->addWidget(mAddButton);
89  buttonLayout->addWidget(mEditButton);
90  buttonLayout->addWidget(mRemoveButton);
92 }
93 
95 {}
96 
98 {
99  //std::cout << "pling" << std::endl;
100 
101  QTableWidgetItem* item = mTable->currentItem();
102 
103  mActiveLandmark = item->data(Qt::UserRole).toString();
104 
105  for (unsigned i=0; i<mSamples.size(); ++i)
106  {
107  if (mSamples[i].getUid()!=mActiveLandmark)
108  continue;
109  setManualTool(mSamples[i].getCoord());
110  break;
111  }
112 
113  enablebuttons();
114 }
115 
116 void PointSamplingWidget::showEvent(QShowEvent* event)
117 {
118  QWidget::showEvent(event);
119 
120  ViewGroupDataPtr data = viewService()->getGroup(0);
121  ViewGroupData::Options options = data->getOptions();
122  options.mShowPointPickerProbe = true;
123  data->setOptions(options);
124 
125  this->updateSlot();
126 }
127 
128 void PointSamplingWidget::hideEvent(QHideEvent* event)
129 {
130  QWidget::hideEvent(event);
131 }
132 
134 {
135  mTable->blockSignals(true);
136  mTable->clear();
137 
138  //ready the table widget
139  mTable->setRowCount(mSamples.size());
140  mTable->setColumnCount(3);
141  QStringList headerItems(QStringList() << "Name" << "Coordinates(r)" << "Delta (mm)");
142  mTable->setHorizontalHeaderLabels(headerItems);
143  mTable->horizontalHeader()->setSectionResizeMode(QHeaderView::ResizeToContents);
144  mTable->setSelectionBehavior(QAbstractItemView::SelectRows);
145 
146  for (unsigned i = 0; i < mSamples.size(); ++i)
147  {
148  std::vector<QTableWidgetItem*> items(3); // name, coordinates, delta
149 
150  Vector3D coord = mSamples[i].getCoord();
151 
152  items[0] = new QTableWidgetItem(qstring_cast(mSamples[i].getUid()));
153 
154  QString coordText;
155  int width = 5;
156  int prec = 1;
157  coordText = tr("(%1, %2, %3)").arg(coord[0], width, 'f', prec).arg(coord[1], width, 'f', prec).arg(coord[2],
158  width, 'f', prec);
159 
160  items[1] = new QTableWidgetItem(coordText);
161 
162  if (i==0)
163  {
164  items[2] = new QTableWidgetItem;
165  }
166  else
167  {
168  double delta = (mSamples[i].getCoord() - mSamples[0].getCoord()).length();
169  items[2] = new QTableWidgetItem(tr("%1").arg(delta, width, 'f', prec));
170  }
171 
172  for (unsigned j = 0; j < items.size(); ++j)
173  {
174  items[j]->setData(Qt::UserRole, qstring_cast(mSamples[i].getUid()));
175  mTable->setItem(i, j, items[j]);
176  }
177 
178  //highlight selected row
179  if (mSamples[i].getUid() == mActiveLandmark)
180  {
181  mTable->setCurrentItem(items[1]);
182  }
183  }
184 
185  mTable->blockSignals(false);
186 
187  this->enablebuttons();
188 }
189 
191 {
192  mAddButton->setEnabled(true);
193  mEditButton->setEnabled(mActiveLandmark!="");
194  mRemoveButton->setEnabled(mActiveLandmark!="");
195  mLoadReferencePointsButton->setEnabled(trackingService()->getReferenceTool() ? true : false);
196 }
197 
199 {
200  // find unique uid:
201  int max = 0;
202  for (unsigned i=0; i<mSamples.size(); ++i)
203  {
204  max = std::max(max, qstring_cast(mSamples[i].getUid()).toInt());
205  }
206  QString uid = qstring_cast(max+1);
207 
208  mSamples.push_back(Landmark(uid, point));
209  mActiveLandmark = uid;
210 
211  this->updateSlot();
212 }
213 
215 {
216  ToolPtr tool = trackingService()->getManualTool();
217 
218  //Transform3D sMr = mSliceProxy->get_sMr();
219  Transform3D rMpr = patientService()->get_rMpr();
220  Transform3D prMt = tool->get_prMt();
221 
222  // find tool position in r
223  Vector3D tool_t(0,0,tool->getTooltipOffset());
224  Vector3D tool_r = (rMpr*prMt).coord(tool_t);
225 
226  // find click position in s.
227  //Vector3D click_s = get_vpMs().inv().coord(click_vp);
228 
229  // compute the new tool position in slice space as a synthesis of the plane part of click and the z part of original.
230  //Vector3D cross_s(click_s[0], click_s[1], tool_s[2]);
231  // compute the position change and transform to patient.
232  Vector3D delta_r = p_r - tool_r;
233  Vector3D delta_pr = rMpr.inv().vector(delta_r);
234 
235  // MD is the actual tool movement in patient space, matrix form
236  Transform3D MD = createTransformTranslate(delta_pr);
237  // set new tool position to old modified by MD:
238  tool->set_prMt(MD*prMt);
239 }
240 
242 {
243  this->addPoint(this->getSample());
244 }
245 
247 {
248 // CoordinateSystem ref = spaceProvider()->getR();
249  Vector3D P_ref = spaceProvider()->getActiveToolTipPoint(CoordinateSystem::reference(), true);
250 
251  return P_ref;
252 }
253 
255 {
256  for (unsigned i=0; i<mSamples.size(); ++i)
257  {
258  if (mSamples[i].getUid()!=mActiveLandmark)
259  continue;
261  }
262  updateSlot();
263 }
264 
266 {
267  for (unsigned i=0; i<mSamples.size(); ++i)
268  {
269  if (mSamples[i].getUid()!=mActiveLandmark)
270  continue;
271  mSamples.erase(mSamples.begin()+i);
272  mActiveLandmark = "";
273  if (i<mSamples.size())
274  mActiveLandmark = mSamples[i].getUid();
275  break;
276  }
277  updateSlot();
278 }
279 
281 {
282 
283 }
284 
286 {
287  ToolPtr refTool = trackingService()->getReferenceTool();
288  if(!refTool) // we only load reference points from reference tools
289  {
290  reportDebug("No reference tool, cannot load reference points into the pointsampler");
291  return;
292  }
293 
294  std::map<int, Vector3D> referencePoints_s = refTool->getReferencePoints();
295  if(referencePoints_s.empty())
296  {
297  reportWarning("No referenceppoints in reference tool "+refTool->getName());
298  return;
299  }
300 
301  CoordinateSystem ref = spaceProvider()->getR();
302  CoordinateSystem sensor = spaceProvider()->getS(refTool);
303 
304  std::map<int, Vector3D>::iterator it = referencePoints_s.begin();
305  for(; it != referencePoints_s.end(); ++it)
306  {
307  Vector3D P_ref = spaceProvider()->get_toMfrom(sensor, ref).coord(it->second);
308  this->addPoint(P_ref);
309  }
310 }
311 
312 }//end namespace cx
QString qstring_cast(const T &val)
QVBoxLayout * mVerticalLayout
vertical layout is used
boost::shared_ptr< class ViewGroupData > ViewGroupDataPtr
Definition: cxViewGroup.h:50
QPushButton * mEditButton
the Edit Landmark button
One landmark, or fiducial, coordinate.
Definition: cxLandmark.h:61
QTableWidget * mTable
the table widget presenting the landmarks
Transform3D Transform3D
Transform3D is a representation of an affine 3D transform.
virtual void hideEvent(QHideEvent *event)
QString mActiveLandmark
uid of surrently selected landmark.
virtual void showEvent(QShowEvent *event)
updates internal info before showing the widget
static CoordinateSystem reference()
QPushButton * mRemoveButton
the Remove Landmark button
PointSamplingWidget(QWidget *parent)
void reportWarning(QString msg)
Definition: cxLogger.cpp:91
void setManualTool(const Vector3D &p_r)
Transform3D createTransformTranslate(const Vector3D &translation)
QPushButton * mLoadReferencePointsButton
button for loading a reference tools reference points
Identification of a Coordinate system.
cxLogicManager_EXPORT SpaceProviderPtr spaceProvider()
QPushButton * mAddButton
the Add Landmark button
Eigen::Vector3d Vector3D
Vector3D is a representation of a point or vector in 3D.
Definition: cxVector3D.h:63
Interface for QWidget which handles widgets uniformly for the system.
Definition: cxBaseWidget.h:108
cxLogicManager_EXPORT ViewServicePtr viewService()
cxLogicManager_EXPORT PatientModelServicePtr patientService()
RealScalar length() const
cxLogicManager_EXPORT TrackingServicePtr trackingService()
void reportDebug(QString msg)
Definition: cxLogger.cpp:89
boost::shared_ptr< class Tool > ToolPtr