CustusX  16.5
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cxViewGroupData.cpp
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1 /*=========================================================================
2 This file is part of CustusX, an Image Guided Therapy Application.
3 
4 Copyright (c) 2008-2014, SINTEF Department of Medical Technology
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32 
33 #include "cxViewGroupData.h"
34 
35 #include <QMenu>
36 #include "vtkCamera.h"
37 
38 #include "cxPatientModelService.h"
39 #include "cxMesh.h"
40 #include "cxTypeConversions.h"
41 #include "cxCameraControl.h"
42 #include "cxImageAlgorithms.h"
43 #include "cxDataMetric.h"
44 #include "cxView.h"
45 #include "cxImage.h"
46 #include "cxTrackedStream.h"
47 #include "cxInteractiveClipper.h"
48 #include "boost/bind.hpp"
49 #include "cxXMLNodeWrapper.h"
50 #include "cxSyncedValue.h"
51 #include "cxCoreServices.h"
52 #include "cxLogger.h"
53 #include "cxDefinitionStrings.h"
54 #include "cxStringListProperty.h"
55 
56 namespace cx
57 {
58 
60 {
61  DataViewProperties retval;
62  retval.mVolume3D = true;
63  retval.mSlice3D = false;
64  retval.mSlice2D = true;
65  return retval;
66 }
68 {
69  DataViewProperties retval;
70  retval.mVolume3D = true;
71  retval.mSlice3D = true;
72  retval.mSlice2D = true;
73  return retval;
74 }
75 
77 {
78  DataViewProperties retval;
79  retval.mVolume3D = true;
80  retval.mSlice3D = false;
81  retval.mSlice2D = false;
82  return retval;
83 }
84 
86 {
87  DataViewProperties retval;
88  retval.mVolume3D = false;
89  retval.mSlice3D = true;
90  retval.mSlice2D = false;
91  return retval;
92 }
93 
95 {
96  DataViewProperties retval;
97  retval.mVolume3D = false;
98  retval.mSlice3D = false;
99  retval.mSlice2D = true;
100  return retval;
101 }
102 
104 {
105  DataViewProperties retval;
106  retval.mVolume3D = true;
107  retval.mSlice3D = true;
108  retval.mSlice2D = false;
109  return retval;
110 }
111 
112 
113 void DataViewProperties::addXml(QDomNode& dataNode)
114 {
115  QDomElement elem = dataNode.toElement();
116  elem.setAttribute("volume3D", mVolume3D);
117  elem.setAttribute("slice3D", mSlice3D);
118  elem.setAttribute("slice2D", mSlice2D);
119 }
120 
121 void DataViewProperties::parseXml(QDomNode dataNode)
122 {
123  QDomElement elem = dataNode.toElement();
124  mVolume3D = elem.attribute("volume3D", QString::number(mVolume3D)).toInt();
125  mSlice3D = elem.attribute("slice3D", QString::number(mSlice3D)).toInt();
126  mSlice2D = elem.attribute("slice2D", QString::number(mSlice2D)).toInt();
127 }
128 
130 {
131  return !(mVolume3D || mSlice3D || mSlice2D);
132 }
133 
135 {
136  DataViewProperties retval;
137  retval.mSlice2D = mSlice2D || rhs.mSlice2D;
138  retval.mSlice3D = mSlice3D || rhs.mSlice3D;
139  retval.mVolume3D = mVolume3D || rhs.mVolume3D;
140  return retval;
141 }
142 
144 {
145  DataViewProperties retval;
146  retval.mSlice2D = mSlice2D && !rhs.mSlice2D;
147  retval.mSlice3D = mSlice3D && !rhs.mSlice3D;
148  retval.mVolume3D = mVolume3D && !rhs.mVolume3D;
149  return retval;
150 }
151 
153 {
154  if (required.mSlice2D && mSlice2D) return true;
155  if (required.mSlice3D && mSlice3D) return true;
156  if (required.mVolume3D && mVolume3D) return true;
157  return false;
158 }
159 
160 
161 
165 
166 bool dataTypeSort(const DataPtr data1, const DataPtr data2)
167 {
168  return getPriority(data1) < getPriority(data2);
169 }
170 
172 {
173  if (data->getType()=="mesh")
174  return 6;
175  DataMetricPtr metric = boost::dynamic_pointer_cast<DataMetric>(data);
176  if (metric)
177  return 7;
178 
179  ImagePtr image = boost::dynamic_pointer_cast<Image>(data);
180  if (image)
181  {
182  if (image->getModality().toUpper().contains("US"))
183  {
184  if (image->getImageType().toUpper().contains("B-MODE"))
185  return 4;
186  else // angio types
187  return 5;
188  }
189  else if (image->getModality().toUpper().contains("MR"))
190  {
191  // MR, CT, SC, others
192  return 2;
193  }
194  else if (image->getModality().toUpper().contains("CT"))
195  {
196  // MR, CT, SC, others
197  return 1;
198  }
199  else
200  {
201  return 0;
202  }
203  }
204 
205  return 3;
206 }
207 
211 
213  mShowLandmarks(false), mShowPointPickerProbe(false),
214  mPickerGlyph(new Mesh("PickerGlyph"))
215 {
216 }
217 
219  mServices(services),
220  mCamera3D(CameraData::create())
221 {
222  if(mServices)
223  connect(mServices->patient().get(), &PatientModelService::dataAddedOrRemoved, this, &ViewGroupData::purgeDataNotExistingInPatientModelService);
224  mVideoSource = "active";
225  mGroup2DZoom = SyncedValue::create(1);
226  mGlobal2DZoom = mGroup2DZoom;
227 
228  this->createSliceDefinitionProperty();
229 }
230 
231 //Remove all data, and wait to emit signals until all data is removed
232 void ViewGroupData::purgeDataNotExistingInPatientModelService()
233 {
234  QStringList purged;
235  for (unsigned i = 0; i < mData.size(); )
236  {
237  QString uid = mData[i].first;
238  if (!mServices->patient()->getData(uid))
239  {
240  if (this->contains(uid))
241  {
242  purged << uid;
243  mData.erase(std::find_if(mData.begin(), mData.end(), data_equals(uid)));
244  }
245  }
246  else
247  ++i;
248  }
249  //Emit delayed signals
250  for(unsigned i = 0; i < purged.size(); ++i)
251  emit dataViewPropertiesChanged(purged[i]);
252 }
253 
254 
256 {
257  emit initialized();
258 }
259 
260 void ViewGroupData::addData(QString uid)
261 {
262  DataViewProperties properties = this->getProperties(uid);
263  properties = properties.addFlagsIn(DataViewProperties::createDefault());
264  this->setProperties(uid, properties);
265 }
266 
268 {
269  if (this->contains(uid))
270  return;
271 
273  DataAndViewProperties item(uid, properties);
274 
275  for (int i=int(mData.size())-1; i>=0; --i)
276  {
277  if (!dataTypeSort(this->getData(uid), this->getData(mData[i].first)))
278  {
279  mData.insert(mData.begin()+i+1, item);
280  break;
281  }
282  }
283  if (!this->contains(uid))
284  mData.insert(mData.begin(), item);
285  emit dataViewPropertiesChanged(uid);
286 }
287 
289 {
290  if (this->contains(uid))
291  return std::find_if(mData.begin(), mData.end(), data_equals(uid))->second;
292  return DataViewProperties();
293 }
294 
296 {
297  if (uid.isEmpty())
298  return;
299 
300  if (properties.empty())
301  {
302  this->removeData(uid);
303  return;
304  }
305 
306  if (!this->contains(uid))
307  {
308  DataAndViewProperties item(uid, properties);
309  mData.push_back(item);
310  }
311  else
312  {
313  std::find_if(mData.begin(), mData.end(), data_equals(uid))->second = properties;
314  }
315 
316  emit dataViewPropertiesChanged(uid);
317 }
318 
319 bool ViewGroupData::contains(QString uid) const
320 {
321  return std::count_if(mData.begin(), mData.end(), data_equals(uid));
322 }
323 
324 bool ViewGroupData::removeData(QString uid)
325 {
326  if (!this->contains(uid))
327  return false;
328  mData.erase(std::find_if(mData.begin(), mData.end(), data_equals(uid)));
329  emit dataViewPropertiesChanged(uid);
330  return true;
331 }
332 
334 {
335  while (!mData.empty())
336  this->removeData(mData.front().first);
337  this->setVideoSource("active");
338 
339  mGroup2DZoom->set(1.0);
340  mGlobal2DZoom->set(1.0);
341 }
342 
343 DataPtr ViewGroupData::getData(QString uid) const
344 {
345  DataPtr data = mServices->patient()->getData(uid);
346  if (!data)
347  {
348  reportError("Couldn't find the data: [" + uid + "] in the datamanager.");
349  return DataPtr();
350  }
351  return data;
352 }
353 
355 {
356  if (mVideoSource==uid)
357  return;
358  mVideoSource = uid;
359  emit videoSourceChanged(mVideoSource);
360 }
361 
363 {
364  return mVideoSource;
365 }
366 
367 std::vector<DataPtr> ViewGroupData::getData(DataViewProperties properties) const
368 {
369  return this->getDataOfType<Data>(properties);
370 }
371 
372 template<class DATA_TYPE>
373 std::vector<boost::shared_ptr<DATA_TYPE> > ViewGroupData::getDataOfType(DataViewProperties requiredProperties) const
374 {
375  typedef boost::shared_ptr<DATA_TYPE> DATA_PTR;
376  std::vector<DATA_PTR> retval;
377  for (unsigned i = 0; i < mData.size(); ++i)
378  {
379  DATA_PTR data = boost::dynamic_pointer_cast<DATA_TYPE>(this->getData(mData[i].first));
380  if (!data)
381  continue;
382  DataViewProperties properties = mData[i].second;
383  if (!properties.containsAnyFlagsIn(requiredProperties))
384  continue;
385  retval.push_back(data);
386  }
387  return retval;
388 }
389 
390 std::vector<ImagePtr> ViewGroupData::getImages(DataViewProperties properties) const
391 {
392  return this->getDataOfType<Image>(properties);
393 }
394 
395 std::vector<MeshPtr> ViewGroupData::getMeshes(DataViewProperties properties) const
396 {
397  return this->getDataOfType<Mesh>(properties);
398 }
399 
400 std::vector<TrackedStreamPtr> ViewGroupData::getTrackedStreams(DataViewProperties properties) const
401 {
402  return this->getDataOfType<TrackedStream>(properties);
403 }
404 
405 std::vector<TrackedStreamPtr> ViewGroupData::getTracked2DStreams(DataViewProperties properties) const
406 {
407  std::vector<TrackedStreamPtr> streams = this->getTrackedStreams(properties);
408  std::vector<TrackedStreamPtr> retval;
409 
410  for(int i = 0; i < streams.size(); ++i)
411  {
412  if(streams[i]->is2D() )
413  retval.push_back(streams[i]);
414  }
415  return retval;
416 }
417 
418 std::vector<ImagePtr> ViewGroupData::getImagesAndChangingImagesFromTrackedStreams(DataViewProperties properties, bool include2D) const
419 {
420  std::vector<ImagePtr> images = this->getImages(properties);
421  std::vector<TrackedStreamPtr> streams = this->getTrackedStreams(properties);
422 
423  for(int i = 0; i < streams.size(); ++i)
424  {
425  ImagePtr changingImage = streams[i]->getChangingImage();
426  if(streams[i]->is3D())
427  images.push_back(changingImage);
428  if(include2D && streams[i]->is2D())
429  images.push_back(changingImage);
430  }
431  return images;
432 }
433 
435 {
436  return mOptions;
437 }
438 
440 {
441  mOptions = options;
442  emit optionsChanged();
443 }
444 
446 {
447  mGlobal2DZoom = val;
448 }
449 
451 {
452  return mGroup2DZoom;
453 }
455 {
456  return mGlobal2DZoom;
457 }
458 
459 void ViewGroupData::createSliceDefinitionProperty()
460 {
461  QStringList slicedefs;
462  for (int i=0; i<ptCOUNT; ++i)
463  slicedefs << enum2string(PLANE_TYPE(i));
464  QStringList slicedefaults;
466  mSliceDefinitionProperty = StringListProperty::initialize("slice_definition_3D",
467  "3D Slices",
468  "Select slice planes to view in 3D",
469  slicedefaults,
470  slicedefs);
471  connect(mSliceDefinitionProperty.get(), &Property::changed, this, &ViewGroupData::optionsChanged);
472 }
473 
475 {
476  QStringList val = mSliceDefinitionProperty->getValue();
477  return PlaneTypeCollection::fromString(val.join("/"));
478 }
479 
481 {
482  QStringList val_list = val.toString().split("/");
483  mSliceDefinitionProperty->setValue(val_list);
484 }
485 
487 {
488  return mSliceDefinitionProperty;
489 }
490 
491 void ViewGroupData::addXml(QDomNode& dataNode)
492 {
493  XMLNodeAdder base(dataNode);
494 
495  for (unsigned i = 0; i < mData.size(); ++i)
496  {
497  QDomElement elem;
498  elem = base.addTextToElement("data", mData[i].first);
499  mData[i].second.addXml(elem);
500  }
501 
502  base.addObjectToElement("camera3D", this->getCamera3D());
503  base.addTextToElement("slicesPlanes3D", this->getSliceDefinitions().toString());
504 }
505 
506 void ViewGroupData::parseXml(QDomNode dataNode)
507 {
508  XMLNodeParser base(dataNode);
509 
510  QString sliceText = base.parseTextFromElement("slicesPlanes3D");
512 
513  std::vector<QDomElement> dataElems = base.getDuplicateElements("data");
514  for (unsigned i=0; i<dataElems.size(); ++i)
515  {
516  QDomElement elem = dataElems[i];
517  QString uid = elem.text();
519  properties.parseXml(elem);
520 
521  this->addData(uid);
522  this->setProperties(uid, properties);
523  }
524 
525  base.parseObjectFromElement("camera3D", this->getCamera3D());
526 }
527 
528 void ViewGroupData::setRegistrationMode(REGISTRATION_STATUS mode)
529 {
530  ViewGroupData::Options options = this->getOptions();
531 
532  options.mShowLandmarks = false;
533  options.mShowPointPickerProbe = false;
534 
535  if (mode == rsIMAGE_REGISTRATED)
536  {
537  options.mShowLandmarks = true;
538  options.mShowPointPickerProbe = true;
539  }
540  if (mode == rsPATIENT_REGISTRATED)
541  {
542  options.mShowLandmarks = true;
543  options.mShowPointPickerProbe = false;
544  }
545 
546  this->setOptions(options);
547 }
548 
549 
550 } // namespace cx
int getPriority(DataPtr data)
static DataViewProperties createSlice3D()
ptCORONAL
a slice seen from the front of the patient
Definition: cxDefinitions.h:56
void reportError(QString msg)
Definition: cxLogger.cpp:92
void initializeGlobal2DZoom(SyncedValuePtr val)
A mesh data set.
Definition: cxMesh.h:61
CameraDataPtr getCamera3D()
void addXml(QDomNode &dataNode)
static DataViewProperties createDefault()
PlaneTypeCollection getSliceDefinitions()
boost::shared_ptr< DataMetric > DataMetricPtr
Definition: cxDataMetric.h:95
void parseXml(QDomNode dataNode)
std::vector< QDomElement > getDuplicateElements(QString name)
boost::shared_ptr< class Image > ImagePtr
Definition: cxDicomWidget.h:48
std::vector< ImagePtr > getImagesAndChangingImagesFromTrackedStreams(DataViewProperties properties, bool include2D=false) const
SyncedValuePtr getGroup2DZoom()
void parseXml(QDomNode dataNode)
SyncedValuePtr getGlobal2DZoom()
DataViewProperties getProperties(QString uid)
ptAXIAL
a slice seen from the top of the patient
Definition: cxDefinitions.h:56
void setProperties(QString uid, DataViewProperties properties)
static DataViewProperties createSlice2D()
static StringListPropertyPtr initialize(const QString &uid, QString name, QString help, QStringList value, QStringList range, QDomNode root=QDomNode())
void addObjectToElement(QString name, T object)
static DataViewProperties create3D()
boost::shared_ptr< class Data > DataPtr
std::vector< MeshPtr > getMeshes(DataViewProperties properties) const
ptSAGITTAL
a slice seen from the side of the patient
Definition: cxDefinitions.h:56
static PlaneTypeCollection fromString(QString input, PlaneTypeCollection defVal=PlaneTypeCollection())
void addData(QString uid)
void addDataSorted(QString uid)
add data in a predefined ordering: CT/MR/SC/US/USA/Mesh/Metrics
std::vector< TrackedStreamPtr > getTracked2DStreams(DataViewProperties properties) const
static SyncedValuePtr create(QVariant val=QVariant())
A volumetric data set.
Definition: cxImage.h:66
QDomElement addTextToElement(QString name, QString text)
Options getOptions() const
void addXml(QDomNode &dataNode)
bool containsAnyFlagsIn(DataViewProperties required) const
static DataViewProperties createFull()
std::vector< ImagePtr > getImages(DataViewProperties properties) const
std::vector< TrackedStreamPtr > getTrackedStreams(DataViewProperties properties) const
void dataViewPropertiesChanged(QString uid)
void changed()
emit when the underlying data value is changed: The user interface will be updated.
static DataViewProperties createVolume3D()
bool dataTypeSort(const DataPtr data1, const DataPtr data2)
bool removeData(QString uid)
boost::shared_ptr< class StringListProperty > StringListPropertyPtr
QString parseTextFromElement(QString name)
void setVideoSource(QString uid)
boost::shared_ptr< class CoreServices > CoreServicesPtr
Definition: cxCameraStyle.h:59
DataViewProperties removeFlagsIn(DataViewProperties rhs) const
void parseObjectFromElement(QString name, T object)
DataViewProperties addFlagsIn(DataViewProperties rhs) const
void videoSourceChanged(QString uid)
boost::shared_ptr< class SyncedValue > SyncedValuePtr
Definition: cxViewGroup.h:51
void setRegistrationMode(REGISTRATION_STATUS mode)
StringListPropertyPtr getSliceDefinitionProperty()
ViewGroupData(CoreServicesPtr services)
std::vector< DataPtr > getData(DataViewProperties properties=DataViewProperties::createFull()) const
Base class for all Data Metrics.
Definition: cxDataMetric.h:64
void setSliceDefinitions(PlaneTypeCollection val)
QString enum2string(const ENUM &val)
QString getVideoSource() const
void setOptions(Options options)
rsIMAGE_REGISTRATED