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cxImageLUT2D.cpp
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1 /*=========================================================================
2 This file is part of CustusX, an Image Guided Therapy Application.
3 
4 Copyright (c) 2008-2014, SINTEF Department of Medical Technology
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32 
33 
34 /*
35  * sscImageLookupTable2D.cpp
36  *
37  * Created on: Jan 9, 2009
38  * Author: christiana
39  */
40 
41 #include "cxImageLUT2D.h"
42 
43 #include <QDomDocument>
44 #include <vtkLookupTable.h>
45 #include <vtkImageData.h>
46 #include <vtkColorTransferFunction.h>
47 #include <vtkPiecewiseFunction.h>
48 
49 #include "cxVector3D.h"
50 
51 
52 namespace cx
53 {
54 
56 {
57 }
58 
59 //void ImageLUT2D::setInitialTFFromImage(vtkImageDataPtr base)
60 //{
61 // double smin = base->GetScalarRange()[0];
62 // double smax = base->GetScalarRange()[1];
63 // double srange = smax - smin;
64 
65 // // this sets the initial opacity tf to full
66 // mOpacityMap.clear();
67 // this->addAlphaPoint(smin - 1, 0);
68 // this->addAlphaPoint(smin, 255);
69 
70 // // this also sets the initial lut to grayscale
71 // mColorMap.clear();
72 // this->addColorPoint(smin, Qt::black);
73 // this->addColorPoint(smax, Qt::white);
74 
90 
91 // this->internalsHaveChanged();
92 //}
93 
95 {
96  ImageLUT2DPtr retval(new ImageLUT2D());
97  retval->deepCopy(this);
98  return retval;
99 }
100 
102 {
103  double smin = image->GetScalarRange()[0];
104  double smax = image->GetScalarRange()[1];
105  double srange = smax - smin;
106  this->setWindow(srange);
107  this->setLevel(smin + srange / 2.0);
108 }
109 
111 {
112  if (!mOutputLUT)
113  {
114  mOutputLUT = vtkLookupTablePtr::New();
115  this->refreshOutputLUT();
116  }
117  return mOutputLUT;
118 }
119 
121 // * This is because the 2D renderer only handles llr+alpha.
122 // */
123 //void ImageLUT2D::buildOpacityMapFromLLRAlpha()
124 //{
125 // // REMOVED CA 2014-02-07 - TODO
126 // mOpacityMap.clear();
129 // this->addAlphaPoint(this->getLLR() - 1, 0);
130 // this->addAlphaPoint(this->getLLR(), this->getAlpha() * 255);
132 //}
133 
135 {
136  this->refreshOutputLUT();
138 }
139 
140 std::pair<int,int> ImageLUT2D::getMapsRange()
141 {
142  if (!mColorMap.empty() && !mOpacityMap.empty())
143  {
144  int imin = std::min(mColorMap.begin()->first, mOpacityMap.begin()->first);
145  int imax = std::max(mColorMap.rbegin()->first, mOpacityMap.rbegin()->first);
146  return std::make_pair(imin,imax);
147  }
148  else if (!mColorMap.empty())
149  {
150  int imin = mColorMap.begin()->first;
151  int imax = mColorMap.rbegin()->first;
152  return std::make_pair(imin,imax);
153  }
154  else if (!mOpacityMap.empty())
155  {
156  int imin = mOpacityMap.begin()->first;
157  int imax = mOpacityMap.rbegin()->first;
158  return std::make_pair(imin,imax);
159  }
160  else
161  {
162  return std::make_pair(0,0);
163  }
164 }
165 
166 void ImageLUT2D::refreshOutputLUT()
167 {
168  if (!mOutputLUT)
169  return;
170 
171  std::pair<int,int> range = this->getMapsRange();
172  int imin = range.first;
173  int imax = range.second;
174  if (imin==imax)
175  imax = imin+1;
176  int icount = imax - imin + 1;
177 
178  vtkLookupTablePtr lut = mOutputLUT;
179  lut->Build();
180  lut->SetNumberOfTableValues(icount);
181  lut->SetTableRange(imin, imax);
182 
183  vtkColorTransferFunctionPtr colorFunc = this->generateColorTF();
184  vtkPiecewiseFunctionPtr opacityFunc = this->generateOpacityTF();
185 
186  for (int i = 0; i < icount; ++i)
187  {
188  double* rgb = colorFunc->GetColor(i + imin);
189  double alpha = opacityFunc->GetValue(i + imin);
190  lut->SetTableValue(i, rgb[0], rgb[1], rgb[2], alpha);
191  }
192 
193  lut->Modified();
194 
195  // HACK WARNING!!!!!
196  // Setting vtkLookupTable::SetNumberOfTableValues > 256 causes
197  // crash in vtkImageMapToColors. Seen when upgrading vtk6.1->6.2
198  // This line hacks away the problem....
199  // http://vtk.1045678.n5.nabble.com/Crash-in-vtkImageMapToColors-when-upgrading-6-1-gt-6-2-td5730804.html
200  // Update: added fix in VTK head -> will be fixed in 6.3
201  unsigned char input = 0;
202  lut->MapScalarsThroughTable2(&input, &input, VTK_UNSIGNED_CHAR, 1, 1, 1);
203  // HACK END
204 }
205 
206 //---------------------------------------------------------
207 } // end namespace
208 //---------------------------------------------------------
209 
210 
void transferFunctionsChanged()
IntIntMap mOpacityMap
ImageLUT2DPtr createCopy()
void setFullRangeWinLevel(vtkImageDataPtr image)
Set winlevel spanning the entire range.
vtkColorTransferFunctionPtr generateColorTF() const
vtkSmartPointer< class vtkPiecewiseFunction > vtkPiecewiseFunctionPtr
vtkSmartPointer< class vtkColorTransferFunction > vtkColorTransferFunctionPtr
virtual void internalsHaveChanged()
boost::shared_ptr< class ImageLUT2D > ImageLUT2DPtr
void setWindow(double val)
range [1..scalarMax-scalarMin]
vtkPiecewiseFunctionPtr generateOpacityTF() const
vtkSmartPointer< class vtkLookupTable > vtkLookupTablePtr
void setLevel(double val)
range [scalarMin..scalarMax]
ColorMap mColorMap
vtkLookupTablePtr getOutputLookupTable()
vtkSmartPointer< class vtkImageData > vtkImageDataPtr