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cxPNNReconstructionMethodService.h
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1 /*=========================================================================
2 This file is part of CustusX, an Image Guided Therapy Application.
3 
4 Copyright (c) 2008-2014, SINTEF Department of Medical Technology
5 All rights reserved.
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7 Redistribution and use in source and binary forms, with or without
8 modification, are permitted provided that the following conditions are met:
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10 1. Redistributions of source code must retain the above copyright notice,
11  this list of conditions and the following disclaimer.
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13 2. Redistributions in binary form must reproduce the above copyright notice,
14  this list of conditions and the following disclaimer in the documentation
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31 =========================================================================*/
32 
33 #ifndef CXPNNRECONSTRUCTIONMETHODSERVICE_H_
34 #define CXPNNRECONSTRUCTIONMETHODSERVICE_H_
35 
37 #include "org_custusx_usreconstruction_pnn_Export.h"
38 #include "cxTransform3D.h"
39 class ctkPluginContext;
40 
41 namespace cx
42 {
43 
55 class org_custusx_usreconstruction_pnn_EXPORT PNNReconstructionMethodService : public ReconstructionMethodService
56 {
58 public:
59  PNNReconstructionMethodService(ctkPluginContext* context);
61 
62  virtual QString getName() const;
63 
64  virtual std::vector<PropertyPtr> getSettings(QDomElement root);
65  virtual bool reconstruct(ProcessedUSInputDataPtr input, vtkImageDataPtr outputData, QDomElement settings);
66 
67 
68 private:
69  DoublePropertyPtr getInterpolationStepsOption(QDomElement root);
70  bool validPixel(int x, int y, const Eigen::Array3i& dims, unsigned char* rawPointer)
71  {
72  return (x >= 0) && (x < dims[0]) && (y >= 0) && (y < dims[1]) && (rawPointer[x + y * dims[0]] != 0);
73  }
74 
75  bool validVoxel(int x, int y, int z, const int* dims)
76  {
77  return (x >= 0) && (x < dims[0]) && (y >= 0) && (y < dims[1]) && (z >= 0) && (z < dims[2]);
78  }
79 
80  void interpolate(ImagePtr inputData, vtkImageDataPtr outputData, QDomElement settings);
81  vtkImageDataPtr createMask(vtkImageDataPtr inputData);
82  void fillHole(unsigned char *inputPointer, unsigned char *outputPointer, int x, int y, int z, const Eigen::Array3i& dim, int interpolationSteps);
83 
84 
85 };
86 //typedef boost::shared_ptr<PNNReconstructionMethodService> PNNReconstructionMethodService*;
87 
88 } /* namespace cx */
89 
90 #endif /* CXPNNRECONSTRUCTIONMETHODSERVICE_H_ */
91 
Abstract interface for reconstruction algorithm.
boost::shared_ptr< class Image > ImagePtr
Definition: cxDicomWidget.h:48
Settings * settings()
Shortcut for accessing the settings instance.
Definition: cxSettings.cpp:42
boost::shared_ptr< class DoubleProperty > DoublePropertyPtr
boost::shared_ptr< class ProcessedUSInputData > ProcessedUSInputDataPtr
vtkSmartPointer< class vtkImageData > vtkImageDataPtr