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cxDicomConverter.h
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1 /*=========================================================================
2 This file is part of CustusX, an Image Guided Therapy Application.
3 
4 Copyright (c) 2008-2014, SINTEF Department of Medical Technology
5 All rights reserved.
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7 Redistribution and use in source and binary forms, with or without
8 modification, are permitted provided that the following conditions are met:
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10 1. Redistributions of source code must retain the above copyright notice,
11  this list of conditions and the following disclaimer.
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13 2. Redistributions in binary form must reproduce the above copyright notice,
14  this list of conditions and the following disclaimer in the documentation
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21 THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
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31 =========================================================================*/
32 
33 #ifndef CXDICOMCONVERTER_H_
34 #define CXDICOMCONVERTER_H_
35 
36 #include "cxImage.h"
37 #include "org_custusx_dicom_Export.h"
38 class ctkDICOMDatabase;
39 
40 namespace cx
41 {
42 typedef boost::shared_ptr<class DicomImageReader> DicomImageReaderPtr;
43 
52 class org_custusx_dicom_EXPORT DicomConverter
53 {
54 public:
56  virtual ~DicomConverter();
57 
58  void setDicomDatabase(ctkDICOMDatabase* database);
59  ImagePtr convertToImage(QString seriesUid);
60 
61 private:
62  QString generateUid(DicomImageReaderPtr reader);
63  QString generateName(DicomImageReaderPtr reader);
64  std::map<double, ImagePtr> sortImagesAlongDirection(std::vector<ImagePtr> images, Vector3D e_sort);
65  ImagePtr mergeSlices(std::map<double, ImagePtr> sorted) const;
66  double getMeanSliceDistance(std::map<double, ImagePtr> sorted) const;
67  bool slicesFormRegularGrid(std::map<double, ImagePtr> sorted, Vector3D e_sort) const;
68  // ignoreLocalizerImages is a tag to ignore special images. For now only localizer images are ignored
69  ImagePtr createCxImageFromDicomFile(QString filename, bool ignoreLocalizerImages);
70  std::vector<ImagePtr> createImages(QStringList files);
71  QString convertToValidFilename(QString text) const;
72 
73  ctkDICOMDatabase* mDatabase;
74 };
75 
76 } /* namespace cx */
77 #endif /* CXDICOMCONVERTER_H_ */
boost::shared_ptr< class Image > ImagePtr
Definition: cxDicomWidget.h:48
boost::shared_ptr< class DicomImageReader > DicomImageReaderPtr
Eigen::Vector3d Vector3D
Vector3D is a representation of a point or vector in 3D.
Definition: cxVector3D.h:63