cxAirwaysFilterService.h

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/*=========================================================================
This file is part of CustusX, an Image Guided Therapy Application.

Copyright (c) 2008-2014, SINTEF Department of Medical Technology
All rights reserved.

Redistribution and use in source and binary forms, with or without 
modification, are permitted provided that the following conditions are met:

1. Redistributions of source code must retain the above copyright notice, 
   this list of conditions and the following disclaimer.

2. Redistributions in binary form must reproduce the above copyright notice, 
   this list of conditions and the following disclaimer in the documentation 
   and/or other materials provided with the distribution.

3. Neither the name of the copyright holder nor the names of its contributors 
   may be used to endorse or promote products derived from this software 
   without specific prior written permission.

THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS" 
AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE 
IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE 
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FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL 
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=========================================================================*/

#ifndef CXAIRWAYSFILTERSERVICE_H_
#define CXAIRWAYSFILTERSERVICE_H_

#include "org_custusx_filter_airways_Export.h"

#include "cxFilter.h"
#include "cxFilterImpl.h"

#include <boost/unordered_map.hpp>
#include <boost/shared_ptr.hpp>

#include "cxPatientModelService.h"

#include "cxStringProperty.h"
#include "cxBoolProperty.h"

class ctkPluginContext;

typedef vtkSmartPointer<class vtkImageData> vtkImageDataPtr;
typedef vtkSmartPointer<class vtkPolyData> vtkPolyDataPtr;

namespace cx {

class org_custusx_filter_airways_EXPORT AirwaysFilter : public FilterImpl
{
Q_OBJECT
Q_INTERFACES(cx::Filter)

public:
        AirwaysFilter(VisServicesPtr services);
        virtual ~AirwaysFilter();

        virtual QString getType() const;
        virtual QString getName() const;
        virtual QString getHelp() const;
    static QString getNameSuffix();
        static QString getNameSuffixStraight();
        static QString getNameSuffixTubes();
        void setDefaultStraightCLTubesOption(bool defaultStraightCLTubesOption);

    bool preProcess();
        virtual bool execute();
        virtual bool postProcess();

protected:
        virtual void createOptions();
        virtual void createInputTypes();
        virtual void createOutputTypes();

private:
    static Vector3D getSeedPointFromTool(SpaceProviderPtr spaceProvider, DataPtr image);
    static bool isSeedPointInsideImage(Vector3D, DataPtr);
        BoolPropertyPtr getManualSeedPointOption(QDomElement root);
    BoolPropertyPtr getLungSegmentationOption(QDomElement root);
        BoolPropertyPtr getStraightCLTubesOption(QDomElement root);
        void createStraightCL();
        void createTubes();
        vtkImageDataPtr mAirwaySegmentationOutput;
    vtkImageDataPtr mLungSegmentationOutput;
        vtkPolyDataPtr mCenterlineOutput;
        Transform3D mTransformation;
        ImagePtr mInputImage;
    Vector3D seedPoint;
        bool mDefaultStraightCLTubesOption;
};
typedef boost::shared_ptr<class AirwaysFilter> AirwaysFilterPtr;

} /* namespace cx */
#endif /* CXTUBESEGMENTATIONFILTERSERVICE_H_ */