In-house algorithms and adapters around external ones. More...

Classes
class	cx::AlgorithmHelper
	Class with helper functions for algorithms. More...

class	cx::CompositeTimedAlgorithm

class	cx::CompositeSerialTimedAlgorithm

class	cx::CompositeParallelTimedAlgorithm

class	cx::ThreadedTimedAlgorithm< T >
	Base class for algorithms that wants to thread and time their execution. T is the return type of the calculated data in the thread. More...

class	cx::TimedBaseAlgorithm
	Base class for algorithms that wants to time their execution. More...

Functions
ImagePtr	cx::resampleImage (PatientModelServicePtr dataManager, ImagePtr image, const Vector3D spacing, QString uid, QString name)

ImagePtr	cx::resampleImage (PatientModelServicePtr dataManager, ImagePtr image, Transform3D qMd)

vtkImageDataPtr	cx::cropImage (vtkImageDataPtr input, IntBoundingBox3D cropbox)

ImagePtr	cx::cropImage (PatientModelServicePtr dataManager, ImagePtr image)

ImagePtr	cx::duplicateImage (PatientModelServicePtr dataManager, ImagePtr image)

QImage	cx::vtkImageDataToQImage (vtkImageDataPtr imageData, bool overlay, QColor overlayColor)

QRgb	cx::convertToQColor (unsigned char *colorsPtr, bool overlay, QColor overlayColor)

bool	cx::isDark (unsigned char *colorsPtr)

QRgb	cx::modifyOverlayColor (unsigned char *colorsPtr, QColor overlayColor)

vtkImageDataPtr	cx::createSlice (ImagePtr image, PLANE_TYPE planeType, Vector3D outputSpacing, Eigen::Array3i outputDimensions, ToolPtr sliceTool, PatientModelServicePtr patientModel, bool applyLUT)
	createSlice Creates a 2D slice through a 3D volume. Result slice will be oriented for radiological view. More...

vtkImageDataPtr	cx::createSlice (ImagePtr image, PLANE_TYPE planeType, Vector3D position_r, Vector3D target_r, double offset, bool applyLUT)

std::vector< int >	cx::getSliceVoxelFrom3Dposition (ImagePtr image, PLANE_TYPE planeType, Vector3D position_r)

int	cx::getSliceNumberFrom3Dposition (ImagePtr image, PLANE_TYPE planeType, Vector3D position_r)

Vector3D	cx::get3DpositionFromSliceVoxel (ImagePtr image, PLANE_TYPE planeType, std::vector< int > voxel, int sliceNumber)

QDateTime	cx::extractTimestamp (QString text)

template<class T >
std::vector< T >	cx::sortOnAcquisitionTime (std::map< QString, T > input)

template<class T >
std::vector< T >	cx::sortOnGroupsAndAcquisitionTime (std::map< QString, T > input)

Detailed Description

In-house algorithms and adapters around external ones.

Function Documentation

cxResource_EXPORT QRgb cx::convertToQColor	(	unsigned char *	colorsPtr,
		bool	overlay,
		QColor	overlayColor
	)

Definition at line 194 of file cxImageAlgorithms.cpp.

cxResource_EXPORT vtkImageDataPtr cx::createSlice	(	ImagePtr	image,
		PLANE_TYPE	planeType,
		Vector3D	outputSpacing,
		Eigen::Array3i	outputDimensions,
		ToolPtr	sliceTool,
		PatientModelServicePtr	patientModel,
		bool	applyLUT
	)

createSlice Creates a 2D slice through a 3D volume. Result slice will be oriented for radiological view.

Parameters

image	Input 3D volume
planeType	Output 2D slice plane type
outputSpacing	Output slice image spacing
outputDimensions	Output slice image dimanesions
sliceTool	Slicing is performed at this tools position
patientModel	CustusX Patient Model. Needed by slicing code
applyLUT	Apply color 3D lookup table values to 2D output slice

Returns: 2D slice as vtkImageData

Definition at line 226 of file cxImageAlgorithms.cpp.

cxResource_EXPORT vtkImageDataPtr cx::createSlice	(	ImagePtr	image,
		PLANE_TYPE	planeType,
		Vector3D	position_r,
		Vector3D	target_r,
		double	offset,
		bool	applyLUT
	)

Definition at line 268 of file cxImageAlgorithms.cpp.

cxResource_EXPORT vtkImageDataPtr cx::cropImage	(	vtkImageDataPtr	input,
		IntBoundingBox3D	cropbox
	)

Return an image that is cropped using its own croppingBox. The image is not added to the data manager nor saved.

Definition at line 113 of file cxImageAlgorithms.cpp.

cxResource_EXPORT ImagePtr cx::cropImage	(	PatientModelServicePtr	dataManager,
		ImagePtr	image
	)

Return an image that is cropped using its own croppingBox. The image is not added to the data manager nor saved.

Definition at line 131 of file cxImageAlgorithms.cpp.

cxResource_EXPORT ImagePtr cx::duplicateImage	(	PatientModelServicePtr	dataManager,
		ImagePtr	image
	)

Return an image that is cropped using its own croppingBox. The image is not added to the data manager nor saved.

Definition at line 104 of file cxImageAlgorithms.cpp.

cxResource_EXPORT QDateTime cx::extractTimestamp ( QString text )

Definition at line 153 of file cxImageAlgorithms.cpp.

cxResource_EXPORT Vector3D cx::get3DpositionFromSliceVoxel	(	ImagePtr	image,
		PLANE_TYPE	planeType,
		std::vector< int >	voxel,
		int	sliceNumber
	)

Definition at line 478 of file cxImageAlgorithms.cpp.

cxResource_EXPORT int cx::getSliceNumberFrom3Dposition	(	ImagePtr	image,
		PLANE_TYPE	planeType,
		Vector3D	position_r
	)

Definition at line 453 of file cxImageAlgorithms.cpp.

cxResource_EXPORT std::vector< int > cx::getSliceVoxelFrom3Dposition	(	ImagePtr	image,
		PLANE_TYPE	planeType,
		Vector3D	position_r
	)

Definition at line 422 of file cxImageAlgorithms.cpp.

cxResource_EXPORT bool cx::isDark ( unsigned char * colorsPtr )

Definition at line 207 of file cxImageAlgorithms.cpp.

cxResource_EXPORT QRgb cx::modifyOverlayColor	(	unsigned char *	colorsPtr,
		QColor	overlayColor
	)

Definition at line 217 of file cxImageAlgorithms.cpp.

cxResource_EXPORT ImagePtr cx::resampleImage	(	PatientModelServicePtr	dataManager,
		ImagePtr	image,
		Transform3D	qMd
	)

Return an image that is resampled into space q. The image is not added to the data manager nor saved.

Definition at line 44 of file cxImageAlgorithms.cpp.

cxResource_EXPORT ImagePtr cx::resampleImage	(	PatientModelServicePtr	dataManager,
		ImagePtr	image,
		const Vector3D	spacing,
		QString	uid,
		QString	name
	)

Return an image that is resampled with a new output spacing. The image is not added to the data manager nor saved.

Definition at line 79 of file cxImageAlgorithms.cpp.

template<class T >

std::vector<T> cx::sortOnAcquisitionTime ( std::map< QString, T > input )

Assume T is DataPtr or a derived class.

Return a vector of data sorted on acquisition time.

Definition at line 77 of file cxImageAlgorithms.h.

template<class T >

std::vector<T> cx::sortOnGroupsAndAcquisitionTime ( std::map< QString, T > input )

Assume T is DataPtr or a derived class.

Return a vector of data sorted on acquisition time.

Definition at line 98 of file cxImageAlgorithms.h.

cxResource_EXPORT QImage cx::vtkImageDataToQImage	(	vtkImageDataPtr	imageData,
		bool	overlay,
		QColor	overlayColor
	)

Definition at line 166 of file cxImageAlgorithms.cpp.

Classes

Functions

Detailed Description

Function Documentation